Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909952.1_cds_XP_016460052.1_53513
CDS Infomation

[gene=LOC107783577] [db_xref=GeneID:107783577] [protein=rop guanine nucleotide exchange factor 12-like] [protein_id=XP_016460052.1] [location=join(1808..1958,2199..2315,2682..2836,2927..3001,3116..3376,3463..3783,4023..4445)] [gbkey=CDS]
Sequence

ATGGTTCGAGCACTAGAAGAAGAGAAAGAGATTCCATCTGCTGAATCTCAAAAGGTTAAT
GGGTTGAAGCTTCTCCGTAAAGAGACCATCATGTCACGTAATAAAGCCGACGATTCAGGC
TCCGCTAACATCAACCAGAACCAGCCTTCAGATATGGAGCTGATGAAGGAAAAATTTGCC
AAGTTGCTCCTTGGTGAGGATATGTCCGGCGGAGGAAAGGGTGTTTCATCAGCATTGGCA
TTGTCAAATGCAATCACAAACTTAGCAGCTTCTGCATTTGGGGAACAGAAGAGATTAGAG
CCCATGCAACCAGAGACAAAAGCCAAGTGGAGAAAAGAAATTGATTGGCTTTTATCTGTT
ACAGATCATATTGTTGAATTTGTTCCTTCTAAACAAAAATCAAAAGATGGAACAAACATG
GAGATTATGGTGACAAAGCAGAGAACTGATCTTCAAATGAACATCCCAGCACTACGCAAA
CTAGACGCGATGCTTCTGGATTGCTTAGATAGTTTTAGAGACCAAAGTGAAATCTCTTAT
ACATCTAAGGATGATGAAGGAAAAAACAGCAGGAAAGATGACAAATGGTGGATACCCACC
CCTAAAGTTCCCCCAAATGGCTTGTCCGATACTACGAGAAAATGGCTGCAATTTCAGAAA
GATTCTGTGAACCAAGTTCATAAAGCAGCCATGGCCATAAATGCTCAAGTTCTAACAGAA
ATGGAGGTCCCTGAAAATTATATAGAATCCCTACCAAAGAATGGGAGAGCAAGCCTTGGA
GACTCGATATACAGGAGCATCACTGACGAATACTTTGATCCGGATTACTTCCTTTCAACT
ATGGACTTGTCTTCAGAACATAAAATTTTAGACCTCAAGAACAGGATTGAGGCTTCTGTA
ATTATATGGAGAAGAAAAATGAATGCTAAAGATGGGAAATCAGCCTGGGGTTCAGCCGTT
AGTATGGAGAAGAGAGAATTATTTGAGGAGAGAGCAGAAACTATCTTGCTTATCCTTAAG
CATCGGTTCCCTGGAATTCCTCAGTCATCACTAGACATAAGCAAAATCCAGTACAACAGA
GATGTGGGGCAAGCTATTTTAGAAAGCTATTCGAGAATAATTGAAAGCAGGGCATACACA
GTCATGTCACGAATCGAAGATGTTCTCCAAGCAGATGCTGTGGCCCAAAATCCTTCCAAT
GGAGAGGTAAAGAGGTTTCCTGGAGATGATTCCTCAGGAGTCGCATCAGAAGCATTCCCG
GATGGTAAGGAAGAAGTAGAGAAGCTTAATTCTGCAGAGACTCCTAATTCAATGACACTG
CTGGATTTCATGGGTTGGGGAGCGGAACAAGGAGACGATGATGCTGAGAAAGAATTGAAG
GAGGACCGAACCAAAGACACTGATGGAAAGCTCCTAAGCAAACCTCCAAATATAGTCACT
AATAAGAGAGTATCTTACCTAGAGAATTTAGCTGGTTCCAGAAGTCCAACAGCACGCCAC
TAG

Peptide Sequence

PEP ID

XP_016460052.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 12-like [Nicotiana tabacum]
Sequence

MVRALEEEKEIPSAESQKVNGLKLLRKETIMSRNKADDSGSANINQNQPSDMELMKEKFA
KLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQKRLEPMQPETKAKWRKEIDWLLSV
TDHIVEFVPSKQKSKDGTNMEIMVTKQRTDLQMNIPALRKLDAMLLDCLDSFRDQSEISY
TSKDDEGKNSRKDDKWWIPTPKVPPNGLSDTTRKWLQFQKDSVNQVHKAAMAINAQVLTE
MEVPENYIESLPKNGRASLGDSIYRSITDEYFDPDYFLSTMDLSSEHKILDLKNRIEASV
IIWRRKMNAKDGKSAWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSLDISKIQYNR
DVGQAILESYSRIIESRAYTVMSRIEDVLQADAVAQNPSNGEVKRFPGDDSSGVASEAFP
DGKEEVEKLNSAETPNSMTLLDFMGWGAEQGDDDAEKELKEDRTKDTDGKLLSKPPNIVT
NKRVSYLENLAGSRSPTARH

Transcript Sequence

Gene sequence data has not been registered.